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Cluster: HRGMv2_2986_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2986_6 HRGMv2_2986_6_80 64941 67433 + GT51
pfam HRGMv2_2986_6 HRGMv2_2986_6_81 67451 68314 + Methyltransf_15 | Methyltrans_SAM
TC HRGMv2_2986_6 HRGMv2_2986_6_82 68317 69165 + 3.A.1.26.7
TC HRGMv2_2986_6 HRGMv2_2986_6_83 69190 70059 + 3.A.1.26.7
TC HRGMv2_2986_6 HRGMv2_2986_6_84 70053 70856 + 3.A.1.25.4
pfam HRGMv2_2986_6 HRGMv2_2986_6_85 70870 71634 + PseudoU_synth_1 | PseudoU_synth_1
pfam HRGMv2_2986_6 HRGMv2_2986_6_86 71624 72787 + DUF5711
TC HRGMv2_2986_6 HRGMv2_2986_6_87 72864 75194 + 3.A.9.1.2
Gene ID: HRGMv2_2986_6_80
Type: CAZyme
Location: 64941 - 67433 (+)
Gene ID: HRGMv2_2986_6_81
Type: pfam
Location: 67451 - 68314 (+)
Gene ID: HRGMv2_2986_6_82
Type: TC
Location: 68317 - 69165 (+)
Gene ID: HRGMv2_2986_6_83
Type: TC
Location: 69190 - 70059 (+)
Gene ID: HRGMv2_2986_6_84
Type: TC
Location: 70053 - 70856 (+)
Gene ID: HRGMv2_2986_6_85
Type: pfam
Location: 70870 - 71634 (+)
Gene ID: HRGMv2_2986_6_86
Type: pfam
Location: 71624 - 72787 (+)
Gene ID: HRGMv2_2986_6_87
Type: TC
Location: 72864 - 75194 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2986_6_80 vegetarian > vegan 1.04221 0.00050
HRGMv2_2986_6_86 vegetarian > vegan 1.16797 0.00050

🧭 Explore Read Mapping of CGC

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