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Cluster: HRGMv2_2986_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2986_3 HRGMv2_2986_3_48 44236 46053 - GH13_39
CAZyme HRGMv2_2986_3 HRGMv2_2986_3_49 46088 47524 - GT5
pfam HRGMv2_2986_3 HRGMv2_2986_3_50 47521 48633 - NTP_transferase | Hexapep_GlmU
pfam HRGMv2_2986_3 HRGMv2_2986_3_51 48660 49838 - NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_2986_3 HRGMv2_2986_3_52 49888 51771 - CBM48 | GH13_9
pfam HRGMv2_2986_3 HRGMv2_2986_3_53 52337 52918 - ECF_trnsprt
TC HRGMv2_2986_3 HRGMv2_2986_3_54 53029 55773 - 3.A.12.1.1
Gene ID: HRGMv2_2986_3_48
Type: CAZyme
Location: 44236 - 46053 (-)
Gene ID: HRGMv2_2986_3_49
Type: CAZyme
Location: 46088 - 47524 (-)
Gene ID: HRGMv2_2986_3_50
Type: pfam
Location: 47521 - 48633 (-)
Gene ID: HRGMv2_2986_3_51
Type: pfam
Location: 48660 - 49838 (-)
Gene ID: HRGMv2_2986_3_52
Type: CAZyme
Location: 49888 - 51771 (-)
Gene ID: HRGMv2_2986_3_53
Type: pfam
Location: 52337 - 52918 (-)
Gene ID: HRGMv2_2986_3_54
Type: TC
Location: 53029 - 55773 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2986_3_53 vegetarian > vegan 1.07796 0.00050

🧭 Explore Read Mapping of CGC

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