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Cluster: HRGMv2_2985_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2985_6 HRGMv2_2985_6_347 378232 379620 - 2.A.2.1.1
pfam HRGMv2_2985_6 HRGMv2_2985_6_348 379739 380602 - Metallophos | Metallophos_2
pfam HRGMv2_2985_6 HRGMv2_2985_6_349 380694 382115 - Wzy_C
TC HRGMv2_2985_6 HRGMv2_2985_6_350 382257 383615 - 2.A.38.4.3
pfam HRGMv2_2985_6 HRGMv2_2985_6_351 384194 385177 + ABC_sub_bind
TC HRGMv2_2985_6 HRGMv2_2985_6_352 385266 386144 + 3.A.1.34.1
TC HRGMv2_2985_6 HRGMv2_2985_6_353 386131 386904 + 3.A.1.34.1
STP HRGMv2_2985_6 HRGMv2_2985_6_354 386947 387180 + PTS-HPr
CAZyme HRGMv2_2985_6 HRGMv2_2985_6_355 387481 388689 + GH29
Gene ID: HRGMv2_2985_6_347
Type: TC
Location: 378232 - 379620 (-)
Gene ID: HRGMv2_2985_6_348
Type: pfam
Location: 379739 - 380602 (-)
Gene ID: HRGMv2_2985_6_349
Type: pfam
Location: 380694 - 382115 (-)
Gene ID: HRGMv2_2985_6_350
Type: TC
Location: 382257 - 383615 (-)
Gene ID: HRGMv2_2985_6_351
Type: pfam
Location: 384194 - 385177 (+)
Gene ID: HRGMv2_2985_6_352
Type: TC
Location: 385266 - 386144 (+)
Gene ID: HRGMv2_2985_6_353
Type: TC
Location: 386131 - 386904 (+)
Gene ID: HRGMv2_2985_6_354
Type: STP
Location: 386947 - 387180 (+)
Gene ID: HRGMv2_2985_6_355
Type: CAZyme
Location: 387481 - 388689 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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