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Cluster: HRGMv2_2985_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2985_18 HRGMv2_2985_18_102 122839 124257 - 8.A.3.1.2
pfam HRGMv2_2985_18 HRGMv2_2985_18_103 124272 125501 - Wzy_C
CAZyme HRGMv2_2985_18 HRGMv2_2985_18_104 125547 126800 - GT4
STP HRGMv2_2985_18 HRGMv2_2985_18_105 127040 127612 + Pribosyltran
pfam HRGMv2_2985_18 HRGMv2_2985_18_106 127671 128834 + Bmp
TC HRGMv2_2985_18 HRGMv2_2985_18_107 129003 130544 + 3.A.1.2.17
TC HRGMv2_2985_18 HRGMv2_2985_18_108 130541 131635 + 3.A.1.2.10
TC HRGMv2_2985_18 HRGMv2_2985_18_109 131632 132588 + 3.A.1.2.17
Gene ID: HRGMv2_2985_18_102
Type: TC
Location: 122839 - 124257 (-)
Gene ID: HRGMv2_2985_18_103
Type: pfam
Location: 124272 - 125501 (-)
Gene ID: HRGMv2_2985_18_104
Type: CAZyme
Location: 125547 - 126800 (-)
Gene ID: HRGMv2_2985_18_105
Type: STP
Location: 127040 - 127612 (+)
Gene ID: HRGMv2_2985_18_106
Type: pfam
Location: 127671 - 128834 (+)
Gene ID: HRGMv2_2985_18_107
Type: TC
Location: 129003 - 130544 (+)
Gene ID: HRGMv2_2985_18_108
Type: TC
Location: 130541 - 131635 (+)
Gene ID: HRGMv2_2985_18_109
Type: TC
Location: 131632 - 132588 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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