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Cluster: HRGMv2_2985_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2985_17 HRGMv2_2985_17_14 11463 12896 - GH111
TC HRGMv2_2985_17 HRGMv2_2985_17_15 13601 15490 + 9.B.18.2.1
CAZyme HRGMv2_2985_17 HRGMv2_2985_17_16 15477 17315 + GT4
TC HRGMv2_2985_17 HRGMv2_2985_17_17 17291 18397 + 9.B.183.1.9
CAZyme HRGMv2_2985_17 HRGMv2_2985_17_18 18459 19526 + GT2
CAZyme HRGMv2_2985_17 HRGMv2_2985_17_19 19528 20367 + GT2
CAZyme HRGMv2_2985_17 HRGMv2_2985_17_20 20458 21567 + GT4
pfam HRGMv2_2985_17 HRGMv2_2985_17_21 21579 22259 + DUF1919
CAZyme HRGMv2_2985_17 HRGMv2_2985_17_22 22281 23249 + GT2
CAZyme HRGMv2_2985_17 HRGMv2_2985_17_23 23257 24168 + GT2
CAZyme HRGMv2_2985_17 HRGMv2_2985_17_24 24183 25160 + GT2
CAZyme HRGMv2_2985_17 HRGMv2_2985_17_25 25178 26065 + GT32
CAZyme HRGMv2_2985_17 HRGMv2_2985_17_26 26087 27040 + GT2
CAZyme HRGMv2_2985_17 HRGMv2_2985_17_27 27050 28018 + GT2
Gene ID: HRGMv2_2985_17_14
Type: CAZyme
Location: 11463 - 12896 (-)
Gene ID: HRGMv2_2985_17_15
Type: TC
Location: 13601 - 15490 (+)
Gene ID: HRGMv2_2985_17_16
Type: CAZyme
Location: 15477 - 17315 (+)
Gene ID: HRGMv2_2985_17_17
Type: TC
Location: 17291 - 18397 (+)
Gene ID: HRGMv2_2985_17_18
Type: CAZyme
Location: 18459 - 19526 (+)
Gene ID: HRGMv2_2985_17_19
Type: CAZyme
Location: 19528 - 20367 (+)
Gene ID: HRGMv2_2985_17_20
Type: CAZyme
Location: 20458 - 21567 (+)
Gene ID: HRGMv2_2985_17_21
Type: pfam
Location: 21579 - 22259 (+)
Gene ID: HRGMv2_2985_17_22
Type: CAZyme
Location: 22281 - 23249 (+)
Gene ID: HRGMv2_2985_17_23
Type: CAZyme
Location: 23257 - 24168 (+)
Gene ID: HRGMv2_2985_17_24
Type: CAZyme
Location: 24183 - 25160 (+)
Gene ID: HRGMv2_2985_17_25
Type: CAZyme
Location: 25178 - 26065 (+)
Gene ID: HRGMv2_2985_17_26
Type: CAZyme
Location: 26087 - 27040 (+)
Gene ID: HRGMv2_2985_17_27
Type: CAZyme
Location: 27050 - 28018 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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