Cluster: HRGMv2_2985_CGC23
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2985
- CGC Family ID: CGCFAM_06197
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2985_16 | HRGMv2_2985_16_50 | 60593 | 61237 | + | 1.C.113.1.1 |
| pfam | HRGMv2_2985_16 | HRGMv2_2985_16_51 | 61307 | 62968 | - | BcrAD_BadFG | HGD-D | HGD-D |
| pfam | HRGMv2_2985_16 | HRGMv2_2985_16_52 | 62978 | 64252 | - | HGD-D |
| CAZyme | HRGMv2_2985_16 | HRGMv2_2985_16_53 | 65408 | 67066 | - | GH13_31 |
| pfam | HRGMv2_2985_16 | HRGMv2_2985_16_54 | 67079 | 69019 | - | GTP_EFTU | EFG_C | EFG_IV | EFG_III | EF-G_D2 |
| pfam | HRGMv2_2985_16 | HRGMv2_2985_16_55 | 69118 | 69636 | + | YcxB |
| TC | HRGMv2_2985_16 | HRGMv2_2985_16_56 | 69689 | 70483 | - | 2.A.5.5.2 |
Gene ID: HRGMv2_2985_16_50
Type: TC
Location: 60593 - 61237 (+)
Type: TC
Location: 60593 - 61237 (+)
Gene ID: HRGMv2_2985_16_51
Type: pfam
Location: 61307 - 62968 (-)
Type: pfam
Location: 61307 - 62968 (-)
Gene ID: HRGMv2_2985_16_52
Type: pfam
Location: 62978 - 64252 (-)
Type: pfam
Location: 62978 - 64252 (-)
Gene ID: HRGMv2_2985_16_53
Type: CAZyme
Location: 65408 - 67066 (-)
Type: CAZyme
Location: 65408 - 67066 (-)
Gene ID: HRGMv2_2985_16_54
Type: pfam
Location: 67079 - 69019 (-)
Type: pfam
Location: 67079 - 69019 (-)
Gene ID: HRGMv2_2985_16_55
Type: pfam
Location: 69118 - 69636 (+)
Type: pfam
Location: 69118 - 69636 (+)
Gene ID: HRGMv2_2985_16_56
Type: TC
Location: 69689 - 70483 (-)
Type: TC
Location: 69689 - 70483 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS263
Species
UMGS263 sp900540535
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.