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Cluster: HRGMv2_2985_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2985_16 HRGMv2_2985_16_28 30748 31632 + 3.A.1.32.2
TC HRGMv2_2985_16 HRGMv2_2985_16_29 31605 33272 + 3.A.1.32.2
TC HRGMv2_2985_16 HRGMv2_2985_16_30 33245 33988 + 3.A.1.32.2
CAZyme HRGMv2_2985_16 HRGMv2_2985_16_31 34158 35570 - GH18
pfam HRGMv2_2985_16 HRGMv2_2985_16_32 35785 36174 + 4HBT | FlK
pfam HRGMv2_2985_16 HRGMv2_2985_16_33 36343 36630 + DUF1905
TC HRGMv2_2985_16 HRGMv2_2985_16_34 36699 38075 - 2.A.22.5.3
CAZyme HRGMv2_2985_16 HRGMv2_2985_16_35 38581 41025 + GH3
Gene ID: HRGMv2_2985_16_28
Type: TC
Location: 30748 - 31632 (+)
Gene ID: HRGMv2_2985_16_29
Type: TC
Location: 31605 - 33272 (+)
Gene ID: HRGMv2_2985_16_30
Type: TC
Location: 33245 - 33988 (+)
Gene ID: HRGMv2_2985_16_31
Type: CAZyme
Location: 34158 - 35570 (-)
Gene ID: HRGMv2_2985_16_32
Type: pfam
Location: 35785 - 36174 (+)
Gene ID: HRGMv2_2985_16_33
Type: pfam
Location: 36343 - 36630 (+)
Gene ID: HRGMv2_2985_16_34
Type: TC
Location: 36699 - 38075 (-)
Gene ID: HRGMv2_2985_16_35
Type: CAZyme
Location: 38581 - 41025 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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