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Cluster: HRGMv2_2985_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2985_15 HRGMv2_2985_15_68 77379 78914 - 2.A.21.9.2
TF HRGMv2_2985_15 HRGMv2_2985_15_69 78961 79662 - Trans_reg_C
TC HRGMv2_2985_15 HRGMv2_2985_15_70 79844 81685 - 3.A.1.135.6
TC HRGMv2_2985_15 HRGMv2_2985_15_71 81682 83439 - 3.A.1.135.7
CAZyme HRGMv2_2985_15 HRGMv2_2985_15_72 83711 85132 + GH29
pfam HRGMv2_2985_15 HRGMv2_2985_15_73 85134 85919 + AP_endonuc_2
pfam HRGMv2_2985_15 HRGMv2_2985_15_74 85929 86273 + DUF6054
TC HRGMv2_2985_15 HRGMv2_2985_15_75 86360 87754 - 2.A.66.1.33
Gene ID: HRGMv2_2985_15_68
Type: TC
Location: 77379 - 78914 (-)
Gene ID: HRGMv2_2985_15_69
Type: TF
Location: 78961 - 79662 (-)
Gene ID: HRGMv2_2985_15_70
Type: TC
Location: 79844 - 81685 (-)
Gene ID: HRGMv2_2985_15_71
Type: TC
Location: 81682 - 83439 (-)
Gene ID: HRGMv2_2985_15_72
Type: CAZyme
Location: 83711 - 85132 (+)
Gene ID: HRGMv2_2985_15_73
Type: pfam
Location: 85134 - 85919 (+)
Gene ID: HRGMv2_2985_15_74
Type: pfam
Location: 85929 - 86273 (+)
Gene ID: HRGMv2_2985_15_75
Type: TC
Location: 86360 - 87754 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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