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Cluster: HRGMv2_2985_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2985_2 HRGMv2_2985_2_77 75324 76082 - 3.A.1.122.14
TC HRGMv2_2985_2 HRGMv2_2985_2_78 76251 76694 + 9.A.11.1.1
TC HRGMv2_2985_2 HRGMv2_2985_2_79 76719 77732 + 9.A.11.1.1
NULL(UNKNOWN) HRGMv2_2985_2 HRGMv2_2985_2_80 77760 77927 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2985_2 HRGMv2_2985_2_81 78117 78401 + Thioredoxin | Thioredoxin_2
CAZyme HRGMv2_2985_2 HRGMv2_2985_2_82 78495 79640 - GH63
TF HRGMv2_2985_2 HRGMv2_2985_2_83 79665 80486 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_2985_2 HRGMv2_2985_2_84 80594 82255 + GH36
TC HRGMv2_2985_2 HRGMv2_2985_2_85 82252 83730 + 2.A.2.3.2
CAZyme HRGMv2_2985_2 HRGMv2_2985_2_86 83904 85028 + CE9
Gene ID: HRGMv2_2985_2_77
Type: TC
Location: 75324 - 76082 (-)
Gene ID: HRGMv2_2985_2_78
Type: TC
Location: 76251 - 76694 (+)
Gene ID: HRGMv2_2985_2_79
Type: TC
Location: 76719 - 77732 (+)
Gene ID: HRGMv2_2985_2_80
Type:
Location: 77760 - 77927 (+)
Gene ID: HRGMv2_2985_2_81
Type: pfam
Location: 78117 - 78401 (+)
Gene ID: HRGMv2_2985_2_82
Type: CAZyme
Location: 78495 - 79640 (-)
Gene ID: HRGMv2_2985_2_83
Type: TF
Location: 79665 - 80486 (-)
Gene ID: HRGMv2_2985_2_84
Type: CAZyme
Location: 80594 - 82255 (+)
Gene ID: HRGMv2_2985_2_85
Type: TC
Location: 82252 - 83730 (+)
Gene ID: HRGMv2_2985_2_86
Type: CAZyme
Location: 83904 - 85028 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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