Cluster: HRGMv2_2985_CGC19
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2985
- CGC Family ID: CGCFAM_06195
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2985_15 | HRGMv2_2985_15_49 | 55954 | 56865 | - | 3.A.1.131.1 |
| TF | HRGMv2_2985_15 | HRGMv2_2985_15_50 | 57305 | 57667 | + | GntR |
| TC | HRGMv2_2985_15 | HRGMv2_2985_15_51 | 57713 | 58615 | + | 3.A.1.128.2 |
| NULL(UNKNOWN) | HRGMv2_2985_15 | HRGMv2_2985_15_52 | 58590 | 60842 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_2985_15 | HRGMv2_2985_15_53 | 61213 | 62064 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_2985_15 | HRGMv2_2985_15_54 | 62255 | 64525 | + | GH127 |
| pfam | HRGMv2_2985_15 | HRGMv2_2985_15_55 | 64570 | 66231 | + | MFS_1 | MFS_2 |
| pfam | HRGMv2_2985_15 | HRGMv2_2985_15_56 | 66233 | 67066 | + | LRR_5 | LRR_5 |
| CAZyme | HRGMv2_2985_15 | HRGMv2_2985_15_57 | 67089 | 69167 | + | GH36 |
| pfam | HRGMv2_2985_15 | HRGMv2_2985_15_58 | 69189 | 69722 | + | Acetyltransf_1 | Acetyltransf_7 |
| NULL(UNKNOWN) | HRGMv2_2985_15 | HRGMv2_2985_15_59 | 69774 | 69965 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2985_15 | HRGMv2_2985_15_60 | 70083 | 70604 | - | 9.B.156.3.1 |
| TC | HRGMv2_2985_15 | HRGMv2_2985_15_61 | 70605 | 71198 | - | 9.B.156.3.1 |
| pfam | HRGMv2_2985_15 | HRGMv2_2985_15_62 | 71371 | 71625 | + | MazE_antitoxin |
| NULL(UNKNOWN) | HRGMv2_2985_15 | HRGMv2_2985_15_63 | 71730 | 72695 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2985_15 | HRGMv2_2985_15_64 | 72708 | 74297 | - | 2.A.50.2.1 |
Gene ID: HRGMv2_2985_15_49
Type: TC
Location: 55954 - 56865 (-)
Type: TC
Location: 55954 - 56865 (-)
Gene ID: HRGMv2_2985_15_50
Type: TF
Location: 57305 - 57667 (+)
Type: TF
Location: 57305 - 57667 (+)
Gene ID: HRGMv2_2985_15_51
Type: TC
Location: 57713 - 58615 (+)
Type: TC
Location: 57713 - 58615 (+)
Gene ID: HRGMv2_2985_15_52
Type:
Location: 58590 - 60842 (+)
Type:
Location: 58590 - 60842 (+)
Gene ID: HRGMv2_2985_15_53
Type: TF
Location: 61213 - 62064 (-)
Type: TF
Location: 61213 - 62064 (-)
Gene ID: HRGMv2_2985_15_54
Type: CAZyme
Location: 62255 - 64525 (+)
Type: CAZyme
Location: 62255 - 64525 (+)
Gene ID: HRGMv2_2985_15_55
Type: pfam
Location: 64570 - 66231 (+)
Type: pfam
Location: 64570 - 66231 (+)
Gene ID: HRGMv2_2985_15_56
Type: pfam
Location: 66233 - 67066 (+)
Type: pfam
Location: 66233 - 67066 (+)
Gene ID: HRGMv2_2985_15_57
Type: CAZyme
Location: 67089 - 69167 (+)
Type: CAZyme
Location: 67089 - 69167 (+)
Gene ID: HRGMv2_2985_15_58
Type: pfam
Location: 69189 - 69722 (+)
Type: pfam
Location: 69189 - 69722 (+)
Gene ID: HRGMv2_2985_15_59
Type:
Location: 69774 - 69965 (-)
Type:
Location: 69774 - 69965 (-)
Gene ID: HRGMv2_2985_15_60
Type: TC
Location: 70083 - 70604 (-)
Type: TC
Location: 70083 - 70604 (-)
Gene ID: HRGMv2_2985_15_61
Type: TC
Location: 70605 - 71198 (-)
Type: TC
Location: 70605 - 71198 (-)
Gene ID: HRGMv2_2985_15_62
Type: pfam
Location: 71371 - 71625 (+)
Type: pfam
Location: 71371 - 71625 (+)
Gene ID: HRGMv2_2985_15_63
Type:
Location: 71730 - 72695 (-)
Type:
Location: 71730 - 72695 (-)
Gene ID: HRGMv2_2985_15_64
Type: TC
Location: 72708 - 74297 (-)
Type: TC
Location: 72708 - 74297 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS263
Species
UMGS263 sp900540535
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.