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Cluster: HRGMv2_2985_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2985_10 HRGMv2_2985_10_297 322526 323695 - 9.B.70.1.1
pfam HRGMv2_2985_10 HRGMv2_2985_10_298 323699 324094 - SpoIIIAC | SpoIIIAC
TC HRGMv2_2985_10 HRGMv2_2985_10_299 324091 324285 - 9.B.70.1.1
pfam HRGMv2_2985_10 HRGMv2_2985_10_300 324305 324622 - Spore_III_AB
TC HRGMv2_2985_10 HRGMv2_2985_10_301 324690 325763 - 9.B.70.1.1
pfam HRGMv2_2985_10 HRGMv2_2985_10_302 325883 328687 + YfhO
TF HRGMv2_2985_10 HRGMv2_2985_10_303 329029 329808 + HTH_3
CAZyme HRGMv2_2985_10 HRGMv2_2985_10_304 329958 332351 - CBM35
Gene ID: HRGMv2_2985_10_297
Type: TC
Location: 322526 - 323695 (-)
Gene ID: HRGMv2_2985_10_298
Type: pfam
Location: 323699 - 324094 (-)
Gene ID: HRGMv2_2985_10_299
Type: TC
Location: 324091 - 324285 (-)
Gene ID: HRGMv2_2985_10_300
Type: pfam
Location: 324305 - 324622 (-)
Gene ID: HRGMv2_2985_10_301
Type: TC
Location: 324690 - 325763 (-)
Gene ID: HRGMv2_2985_10_302
Type: pfam
Location: 325883 - 328687 (+)
Gene ID: HRGMv2_2985_10_303
Type: TF
Location: 329029 - 329808 (+)
Gene ID: HRGMv2_2985_10_304
Type: CAZyme
Location: 329958 - 332351 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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