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Cluster: HRGMv2_2985_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2985_7 HRGMv2_2985_7_103 109416 111020 + 3.A.1.5.20
TC HRGMv2_2985_7 HRGMv2_2985_7_104 111052 112050 + 3.A.1.5.20
TC HRGMv2_2985_7 HRGMv2_2985_7_105 112047 112871 + 3.A.1.5.2
TC HRGMv2_2985_7 HRGMv2_2985_7_106 112892 113842 + 3.A.1.5.37
TC HRGMv2_2985_7 HRGMv2_2985_7_107 113852 114466 + 3.A.1.5.3
STP HRGMv2_2985_7 HRGMv2_2985_7_108 114622 115257 + TetR_N
pfam HRGMv2_2985_7 HRGMv2_2985_7_109 115555 116463 + DAGK_cat | YegS_C
CAZyme HRGMv2_2985_7 HRGMv2_2985_7_110 116540 118531 - GH18
CAZyme HRGMv2_2985_7 HRGMv2_2985_7_111 118728 121403 - GH95
Gene ID: HRGMv2_2985_7_103
Type: TC
Location: 109416 - 111020 (+)
Gene ID: HRGMv2_2985_7_104
Type: TC
Location: 111052 - 112050 (+)
Gene ID: HRGMv2_2985_7_105
Type: TC
Location: 112047 - 112871 (+)
Gene ID: HRGMv2_2985_7_106
Type: TC
Location: 112892 - 113842 (+)
Gene ID: HRGMv2_2985_7_107
Type: TC
Location: 113852 - 114466 (+)
Gene ID: HRGMv2_2985_7_108
Type: STP
Location: 114622 - 115257 (+)
Gene ID: HRGMv2_2985_7_109
Type: pfam
Location: 115555 - 116463 (+)
Gene ID: HRGMv2_2985_7_110
Type: CAZyme
Location: 116540 - 118531 (-)
Gene ID: HRGMv2_2985_7_111
Type: CAZyme
Location: 118728 - 121403 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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