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Cluster: HRGMv2_2984_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2984_3 HRGMv2_2984_3_123 130934 132706 - 3.A.1.135.6
TC HRGMv2_2984_3 HRGMv2_2984_3_124 132718 134475 - 3.A.1.135.6
NULL(UNKNOWN) HRGMv2_2984_3 HRGMv2_2984_3_125 134479 134901 - NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_2984_3 HRGMv2_2984_3_126 135114 135677 - TetR_N
CAZyme HRGMv2_2984_3 HRGMv2_2984_3_127 135761 136603 + GT8
pfam HRGMv2_2984_3 HRGMv2_2984_3_128 136617 137219 + SRAP
STP HRGMv2_2984_3 HRGMv2_2984_3_129 137270 137488 - HMA
TC HRGMv2_2984_3 HRGMv2_2984_3_130 137542 140556 - 3.A.3.5.15
pfam HRGMv2_2984_3 HRGMv2_2984_3_131 140583 140888 - Trns_repr_metal
NULL(UNKNOWN) HRGMv2_2984_3 HRGMv2_2984_3_132 141003 142211 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2984_3 HRGMv2_2984_3_133 142215 143528 - 3.A.1.5.19
TC HRGMv2_2984_3 HRGMv2_2984_3_134 143544 145283 - 3.A.1.5.19
TC HRGMv2_2984_3 HRGMv2_2984_3_135 145295 146284 - 3.A.1.5.2
TC HRGMv2_2984_3 HRGMv2_2984_3_136 146291 147862 - 3.A.1.5.10
TC HRGMv2_2984_3 HRGMv2_2984_3_137 147956 150088 - 3.A.1.5.25
Gene ID: HRGMv2_2984_3_123
Type: TC
Location: 130934 - 132706 (-)
Gene ID: HRGMv2_2984_3_124
Type: TC
Location: 132718 - 134475 (-)
Gene ID: HRGMv2_2984_3_125
Type:
Location: 134479 - 134901 (-)
Gene ID: HRGMv2_2984_3_126
Type: STP
Location: 135114 - 135677 (-)
Gene ID: HRGMv2_2984_3_127
Type: CAZyme
Location: 135761 - 136603 (+)
Gene ID: HRGMv2_2984_3_128
Type: pfam
Location: 136617 - 137219 (+)
Gene ID: HRGMv2_2984_3_129
Type: STP
Location: 137270 - 137488 (-)
Gene ID: HRGMv2_2984_3_130
Type: TC
Location: 137542 - 140556 (-)
Gene ID: HRGMv2_2984_3_131
Type: pfam
Location: 140583 - 140888 (-)
Gene ID: HRGMv2_2984_3_132
Type:
Location: 141003 - 142211 (-)
Gene ID: HRGMv2_2984_3_133
Type: TC
Location: 142215 - 143528 (-)
Gene ID: HRGMv2_2984_3_134
Type: TC
Location: 143544 - 145283 (-)
Gene ID: HRGMv2_2984_3_135
Type: TC
Location: 145295 - 146284 (-)
Gene ID: HRGMv2_2984_3_136
Type: TC
Location: 146291 - 147862 (-)
Gene ID: HRGMv2_2984_3_137
Type: TC
Location: 147956 - 150088 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2984_3_123 omnivore > vegan 1.03487 0.04948
HRGMv2_2984_3_129 vegetarian > vegan 1.41273 0.00863
HRGMv2_2984_3_135 vegetarian > vegan 2.43752 0.00863
HRGMv2_2984_3_136 vegetarian > vegan 1.32090 0.00863

🧭 Explore Read Mapping of CGC

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