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Cluster: HRGMv2_2984_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2984_3 HRGMv2_2984_3_107 110549 112549 - GH31_7
TC HRGMv2_2984_3 HRGMv2_2984_3_108 112546 113373 - 3.A.1.1.39
TC HRGMv2_2984_3 HRGMv2_2984_3_109 113363 114286 - 3.A.1.1.11
TC HRGMv2_2984_3 HRGMv2_2984_3_110 114364 115659 - 3.A.1.1.5
TF HRGMv2_2984_3 HRGMv2_2984_3_111 115777 116823 - LacI
pfam HRGMv2_2984_3 HRGMv2_2984_3_112 117019 118812 + Glyco_hydro_125
CAZyme HRGMv2_2984_3 HRGMv2_2984_3_113 118802 120916 + GH65
Gene ID: HRGMv2_2984_3_107
Type: CAZyme
Location: 110549 - 112549 (-)
Gene ID: HRGMv2_2984_3_108
Type: TC
Location: 112546 - 113373 (-)
Gene ID: HRGMv2_2984_3_109
Type: TC
Location: 113363 - 114286 (-)
Gene ID: HRGMv2_2984_3_110
Type: TC
Location: 114364 - 115659 (-)
Gene ID: HRGMv2_2984_3_111
Type: TF
Location: 115777 - 116823 (-)
Gene ID: HRGMv2_2984_3_112
Type: pfam
Location: 117019 - 118812 (+)
Gene ID: HRGMv2_2984_3_113
Type: CAZyme
Location: 118802 - 120916 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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