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Cluster: HRGMv2_2984_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2984_22 HRGMv2_2984_22_4 2687 3262 + 3.A.1.5.20
TC HRGMv2_2984_22 HRGMv2_2984_22_5 3275 4255 + 3.A.1.5.2
TC HRGMv2_2984_22 HRGMv2_2984_22_6 4252 5211 + 3.A.1.5.15
peptidase HRGMv2_2984_22 HRGMv2_2984_22_7 5225 7006 + M38.UNW
pfam HRGMv2_2984_22 HRGMv2_2984_22_8 7515 7769 + Asp_Glu_race
CAZyme HRGMv2_2984_22 HRGMv2_2984_22_9 8308 10308 - GH13_39
pfam HRGMv2_2984_22 HRGMv2_2984_22_10 10305 11051 - Phosphorylase
CAZyme HRGMv2_2984_22 HRGMv2_2984_22_11 11059 12537 - GT5
CAZyme HRGMv2_2984_22 HRGMv2_2984_22_12 12603 14564 - CBM48 | GH13_9
Gene ID: HRGMv2_2984_22_4
Type: TC
Location: 2687 - 3262 (+)
Gene ID: HRGMv2_2984_22_5
Type: TC
Location: 3275 - 4255 (+)
Gene ID: HRGMv2_2984_22_6
Type: TC
Location: 4252 - 5211 (+)
Gene ID: HRGMv2_2984_22_7
Type: peptidase
Location: 5225 - 7006 (+)
Gene ID: HRGMv2_2984_22_8
Type: pfam
Location: 7515 - 7769 (+)
Gene ID: HRGMv2_2984_22_9
Type: CAZyme
Location: 8308 - 10308 (-)
Gene ID: HRGMv2_2984_22_10
Type: pfam
Location: 10305 - 11051 (-)
Gene ID: HRGMv2_2984_22_11
Type: CAZyme
Location: 11059 - 12537 (-)
Gene ID: HRGMv2_2984_22_12
Type: CAZyme
Location: 12603 - 14564 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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