dbCAN Logo

Cluster: HRGMv2_2983_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2983_10 HRGMv2_2983_10_60 58660 60117 - 2.A.66.2.23
CAZyme HRGMv2_2983_10 HRGMv2_2983_10_61 60121 61098 - GT2
CAZyme HRGMv2_2983_10 HRGMv2_2983_10_62 61131 62114 - GT2
pfam HRGMv2_2983_10 HRGMv2_2983_10_63 62297 63208 - Indigoidine_A
TC HRGMv2_2983_10 HRGMv2_2983_10_64 63291 64235 - 3.A.1.2.17
TC HRGMv2_2983_10 HRGMv2_2983_10_65 64232 65356 - 3.A.1.2.10
TC HRGMv2_2983_10 HRGMv2_2983_10_66 65349 66890 - 3.A.1.2.12
NULL(UNKNOWN) HRGMv2_2983_10 HRGMv2_2983_10_67 66933 68117 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2983_10 HRGMv2_2983_10_68 68332 69402 - 3.A.1.2.17
Gene ID: HRGMv2_2983_10_60
Type: TC
Location: 58660 - 60117 (-)
Gene ID: HRGMv2_2983_10_61
Type: CAZyme
Location: 60121 - 61098 (-)
Gene ID: HRGMv2_2983_10_62
Type: CAZyme
Location: 61131 - 62114 (-)
Gene ID: HRGMv2_2983_10_63
Type: pfam
Location: 62297 - 63208 (-)
Gene ID: HRGMv2_2983_10_64
Type: TC
Location: 63291 - 64235 (-)
Gene ID: HRGMv2_2983_10_65
Type: TC
Location: 64232 - 65356 (-)
Gene ID: HRGMv2_2983_10_66
Type: TC
Location: 65349 - 66890 (-)
Gene ID: HRGMv2_2983_10_67
Type:
Location: 66933 - 68117 (-)
Gene ID: HRGMv2_2983_10_68
Type: TC
Location: 68332 - 69402 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List