Cluster: HRGMv2_2983_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2983
- CGC Family ID: CGCFAM_00092
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2983_5 | HRGMv2_2983_5_88 | 88682 | 90847 | - | GH112 |
| pfam | HRGMv2_2983_5 | HRGMv2_2983_5_89 | 90862 | 91053 | - | DUF6903 |
| TC | HRGMv2_2983_5 | HRGMv2_2983_5_90 | 91063 | 91944 | - | 3.A.1.1.25 |
| TC | HRGMv2_2983_5 | HRGMv2_2983_5_91 | 91960 | 92844 | - | 3.A.1.1.45 |
Gene ID: HRGMv2_2983_5_88
Type: CAZyme
Location: 88682 - 90847 (-)
Type: CAZyme
Location: 88682 - 90847 (-)
Gene ID: HRGMv2_2983_5_89
Type: pfam
Location: 90862 - 91053 (-)
Type: pfam
Location: 90862 - 91053 (-)
Gene ID: HRGMv2_2983_5_90
Type: TC
Location: 91063 - 91944 (-)
Type: TC
Location: 91063 - 91944 (-)
Gene ID: HRGMv2_2983_5_91
Type: TC
Location: 91960 - 92844 (-)
Type: TC
Location: 91960 - 92844 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Species
Limivicinus sp900754515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.