Cluster: HRGMv2_2983_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2983
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2983_60 | HRGMv2_2983_60_1 | 733 | 2319 | - | GH77 |
| TC | HRGMv2_2983_60 | HRGMv2_2983_60_2 | 2350 | 3192 | - | 3.A.1.1.45 |
| TC | HRGMv2_2983_60 | HRGMv2_2983_60_3 | 3192 | 4043 | - | 3.A.1.1.45 |
| TC | HRGMv2_2983_60 | HRGMv2_2983_60_4 | 4251 | 5594 | - | 3.A.1.1.45 |
Gene ID: HRGMv2_2983_60_1
Type: CAZyme
Location: 733 - 2319 (-)
Type: CAZyme
Location: 733 - 2319 (-)
Gene ID: HRGMv2_2983_60_2
Type: TC
Location: 2350 - 3192 (-)
Type: TC
Location: 2350 - 3192 (-)
Gene ID: HRGMv2_2983_60_3
Type: TC
Location: 3192 - 4043 (-)
Type: TC
Location: 3192 - 4043 (-)
Gene ID: HRGMv2_2983_60_4
Type: TC
Location: 4251 - 5594 (-)
Type: TC
Location: 4251 - 5594 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Species
Limivicinus sp900754515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.