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Cluster: HRGMv2_2983_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2983_25 HRGMv2_2983_25_6 5865 7316 - 2.A.66.2.2
CAZyme HRGMv2_2983_25 HRGMv2_2983_25_7 7326 8426 - GT4
pfam HRGMv2_2983_25 HRGMv2_2983_25_8 8429 9352 - ATPgrasp_TupA
CAZyme HRGMv2_2983_25 HRGMv2_2983_25_9 9354 10439 - GT4
pfam HRGMv2_2983_25 HRGMv2_2983_25_10 10429 11163 - DUF2334
CAZyme HRGMv2_2983_25 HRGMv2_2983_25_11 11160 12260 - GT4
CAZyme HRGMv2_2983_25 HRGMv2_2983_25_12 12257 13348 - GT4
pfam HRGMv2_2983_25 HRGMv2_2983_25_13 13350 14240 - 3Beta_HSD | NmrA | NAD_binding_10
TC HRGMv2_2983_25 HRGMv2_2983_25_14 14237 14851 - 9.B.18.1.1
Gene ID: HRGMv2_2983_25_6
Type: TC
Location: 5865 - 7316 (-)
Gene ID: HRGMv2_2983_25_7
Type: CAZyme
Location: 7326 - 8426 (-)
Gene ID: HRGMv2_2983_25_8
Type: pfam
Location: 8429 - 9352 (-)
Gene ID: HRGMv2_2983_25_9
Type: CAZyme
Location: 9354 - 10439 (-)
Gene ID: HRGMv2_2983_25_10
Type: pfam
Location: 10429 - 11163 (-)
Gene ID: HRGMv2_2983_25_11
Type: CAZyme
Location: 11160 - 12260 (-)
Gene ID: HRGMv2_2983_25_12
Type: CAZyme
Location: 12257 - 13348 (-)
Gene ID: HRGMv2_2983_25_13
Type: pfam
Location: 13350 - 14240 (-)
Gene ID: HRGMv2_2983_25_14
Type: TC
Location: 14237 - 14851 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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