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Cluster: HRGMv2_2983_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2983_17 HRGMv2_2983_17_37 36421 37161 - 3.A.1.3.20
TC HRGMv2_2983_17 HRGMv2_2983_17_38 37172 38302 - 3.A.1.3.20
TC HRGMv2_2983_17 HRGMv2_2983_17_39 38362 39249 - 3.A.1.3.23
TC HRGMv2_2983_17 HRGMv2_2983_17_40 39789 41117 + 2.A.38.4.1
TC HRGMv2_2983_17 HRGMv2_2983_17_41 41376 42023 + 2.A.38.4.3
CAZyme HRGMv2_2983_17 HRGMv2_2983_17_42 42701 45079 - GH13_39
CAZyme HRGMv2_2983_17 HRGMv2_2983_17_43 45067 46545 - GT5
CAZyme HRGMv2_2983_17 HRGMv2_2983_17_44 46590 48551 - GH13_9
Gene ID: HRGMv2_2983_17_37
Type: TC
Location: 36421 - 37161 (-)
Gene ID: HRGMv2_2983_17_38
Type: TC
Location: 37172 - 38302 (-)
Gene ID: HRGMv2_2983_17_39
Type: TC
Location: 38362 - 39249 (-)
Gene ID: HRGMv2_2983_17_40
Type: TC
Location: 39789 - 41117 (+)
Gene ID: HRGMv2_2983_17_41
Type: TC
Location: 41376 - 42023 (+)
Gene ID: HRGMv2_2983_17_42
Type: CAZyme
Location: 42701 - 45079 (-)
Gene ID: HRGMv2_2983_17_43
Type: CAZyme
Location: 45067 - 46545 (-)
Gene ID: HRGMv2_2983_17_44
Type: CAZyme
Location: 46590 - 48551 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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