Cluster: HRGMv2_2983_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2983
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2983_1 | HRGMv2_2983_1_48 | 43575 | 46100 | - | 3.A.3.30.4 |
| NULL(UNKNOWN) | HRGMv2_2983_1 | HRGMv2_2983_1_49 | 46600 | 47820 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2983_1 | HRGMv2_2983_1_50 | 48515 | 49582 | - | GT2 |
Gene ID: HRGMv2_2983_1_48
Type: TC
Location: 43575 - 46100 (-)
Type: TC
Location: 43575 - 46100 (-)
Gene ID: HRGMv2_2983_1_49
Type:
Location: 46600 - 47820 (-)
Type:
Location: 46600 - 47820 (-)
Gene ID: HRGMv2_2983_1_50
Type: CAZyme
Location: 48515 - 49582 (-)
Type: CAZyme
Location: 48515 - 49582 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Species
Limivicinus sp900754515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.