Cluster: HRGMv2_2982_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2982
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2982_4 | HRGMv2_2982_4_27 | 24632 | 25372 | + | GH25 |
| TC | HRGMv2_2982_4 | HRGMv2_2982_4_28 | 25626 | 26987 | + | 2.A.40.7.6 |
| TC | HRGMv2_2982_4 | HRGMv2_2982_4_29 | 27105 | 28223 | + | 2.A.45.2.6 |
| NULL(UNKNOWN) | HRGMv2_2982_4 | HRGMv2_2982_4_30 | 28308 | 28829 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2982_4 | HRGMv2_2982_4_31 | 29012 | 30616 | - | 2.A.36.6.11 |
Gene ID: HRGMv2_2982_4_27
Type: CAZyme
Location: 24632 - 25372 (+)
Type: CAZyme
Location: 24632 - 25372 (+)
Gene ID: HRGMv2_2982_4_28
Type: TC
Location: 25626 - 26987 (+)
Type: TC
Location: 25626 - 26987 (+)
Gene ID: HRGMv2_2982_4_29
Type: TC
Location: 27105 - 28223 (+)
Type: TC
Location: 27105 - 28223 (+)
Gene ID: HRGMv2_2982_4_30
Type:
Location: 28308 - 28829 (-)
Type:
Location: 28308 - 28829 (-)
Gene ID: HRGMv2_2982_4_31
Type: TC
Location: 29012 - 30616 (-)
Type: TC
Location: 29012 - 30616 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Egerieicola
Species
Egerieicola faecalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.