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Cluster: HRGMv2_2982_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2982_33 HRGMv2_2982_33_1 20 988 - GT2
pfam HRGMv2_2982_33 HRGMv2_2982_33_2 1241 1702 + GtrA_DPMS_TM
TC HRGMv2_2982_33 HRGMv2_2982_33_3 1867 2568 + 3.A.1.125.2
pfam HRGMv2_2982_33 HRGMv2_2982_33_4 2581 5838 + FtsX | FtsX | MacB_PCD | MacB_PCD
STP HRGMv2_2982_33 HRGMv2_2982_33_5 5828 6559 + Pribosyltran
TC HRGMv2_2982_33 HRGMv2_2982_33_6 6652 7425 + 3.A.1.103.4
TC HRGMv2_2982_33 HRGMv2_2982_33_7 7444 8187 + 3.A.1.103.1
CAZyme HRGMv2_2982_33 HRGMv2_2982_33_8 8221 10722 + GT2 | GT2
Gene ID: HRGMv2_2982_33_1
Type: CAZyme
Location: 20 - 988 (-)
Gene ID: HRGMv2_2982_33_2
Type: pfam
Location: 1241 - 1702 (+)
Gene ID: HRGMv2_2982_33_3
Type: TC
Location: 1867 - 2568 (+)
Gene ID: HRGMv2_2982_33_4
Type: pfam
Location: 2581 - 5838 (+)
Gene ID: HRGMv2_2982_33_5
Type: STP
Location: 5828 - 6559 (+)
Gene ID: HRGMv2_2982_33_6
Type: TC
Location: 6652 - 7425 (+)
Gene ID: HRGMv2_2982_33_7
Type: TC
Location: 7444 - 8187 (+)
Gene ID: HRGMv2_2982_33_8
Type: CAZyme
Location: 8221 - 10722 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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