Cluster: HRGMv2_2982_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2982
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2982_16 | HRGMv2_2982_16_9 | 12253 | 17286 | - | CBM35 | CBM35 | GH39 |
| pfam | HRGMv2_2982_16 | HRGMv2_2982_16_10 | 17521 | 17886 | - | PemK_toxin |
| pfam | HRGMv2_2982_16 | HRGMv2_2982_16_11 | 18698 | 19312 | + | ECF-ribofla_trS | ECF_trnsprt |
| TC | HRGMv2_2982_16 | HRGMv2_2982_16_12 | 20135 | 21805 | + | 3.A.1.106.12 |
Gene ID: HRGMv2_2982_16_9
Type: CAZyme
Location: 12253 - 17286 (-)
Type: CAZyme
Location: 12253 - 17286 (-)
Gene ID: HRGMv2_2982_16_10
Type: pfam
Location: 17521 - 17886 (-)
Type: pfam
Location: 17521 - 17886 (-)
Gene ID: HRGMv2_2982_16_11
Type: pfam
Location: 18698 - 19312 (+)
Type: pfam
Location: 18698 - 19312 (+)
Gene ID: HRGMv2_2982_16_12
Type: TC
Location: 20135 - 21805 (+)
Type: TC
Location: 20135 - 21805 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Egerieicola
Species
Egerieicola faecalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.