Cluster: HRGMv2_2982_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2982
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2982_10 | HRGMv2_2982_10_37 | 40902 | 41201 | + | 1.A.11.2.7 |
| TC | HRGMv2_2982_10 | HRGMv2_2982_10_38 | 41223 | 42611 | + | 1.A.11.2.7 |
| pfam | HRGMv2_2982_10 | HRGMv2_2982_10_39 | 42681 | 43556 | - | CN_hydrolase |
| CAZyme | HRGMv2_2982_10 | HRGMv2_2982_10_40 | 46132 | 51354 | + | CBM13 | CBM13 |
Gene ID: HRGMv2_2982_10_37
Type: TC
Location: 40902 - 41201 (+)
Type: TC
Location: 40902 - 41201 (+)
Gene ID: HRGMv2_2982_10_38
Type: TC
Location: 41223 - 42611 (+)
Type: TC
Location: 41223 - 42611 (+)
Gene ID: HRGMv2_2982_10_39
Type: pfam
Location: 42681 - 43556 (-)
Type: pfam
Location: 42681 - 43556 (-)
Gene ID: HRGMv2_2982_10_40
Type: CAZyme
Location: 46132 - 51354 (+)
Type: CAZyme
Location: 46132 - 51354 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Egerieicola
Species
Egerieicola faecalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.