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Cluster: HRGMv2_2980_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2980_26 HRGMv2_2980_26_1 70 2238 - GH36
sulfatase HRGMv2_2980_26 HRGMv2_2980_26_2 2403 3863 + S1_N.C.
TC HRGMv2_2980_26 HRGMv2_2980_26_3 3958 4830 + 3.A.1.1.28
TC HRGMv2_2980_26 HRGMv2_2980_26_4 4830 5672 + 3.A.1.1.45
STP HRGMv2_2980_26 HRGMv2_2980_26_5 5732 7042 + SBP_bac_1
TF HRGMv2_2980_26 HRGMv2_2980_26_6 7163 8689 + HTH_AraC | HTH_AraC
TC HRGMv2_2980_26 HRGMv2_2980_26_7 8707 10479 + 8.A.59.2.1
CAZyme HRGMv2_2980_26 HRGMv2_2980_26_8 10621 14004 + GH16
pfam HRGMv2_2980_26 HRGMv2_2980_26_9 14373 15323 + 2-Hacid_dh | 2-Hacid_dh_C
TC HRGMv2_2980_26 HRGMv2_2980_26_10 15358 16695 + 2.A.66.1.7
Gene ID: HRGMv2_2980_26_1
Type: CAZyme
Location: 70 - 2238 (-)
Gene ID: HRGMv2_2980_26_2
Type: sulfatase
Location: 2403 - 3863 (+)
Gene ID: HRGMv2_2980_26_3
Type: TC
Location: 3958 - 4830 (+)
Gene ID: HRGMv2_2980_26_4
Type: TC
Location: 4830 - 5672 (+)
Gene ID: HRGMv2_2980_26_5
Type: STP
Location: 5732 - 7042 (+)
Gene ID: HRGMv2_2980_26_6
Type: TF
Location: 7163 - 8689 (+)
Gene ID: HRGMv2_2980_26_7
Type: TC
Location: 8707 - 10479 (+)
Gene ID: HRGMv2_2980_26_8
Type: CAZyme
Location: 10621 - 14004 (+)
Gene ID: HRGMv2_2980_26_9
Type: pfam
Location: 14373 - 15323 (+)
Gene ID: HRGMv2_2980_26_10
Type: TC
Location: 15358 - 16695 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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