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Cluster: HRGMv2_2980_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2980_1 HRGMv2_2980_1_115 120679 122079 + 2.A.66.1.28
pfam HRGMv2_2980_1 HRGMv2_2980_1_116 122155 123033 + NAD_binding_2 | F420_oxidored | NAD_binding_11
NULL(UNKNOWN) HRGMv2_2980_1 HRGMv2_2980_1_117 123148 123807 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2980_1 HRGMv2_2980_1_118 124055 125788 - GH2
CAZyme HRGMv2_2980_1 HRGMv2_2980_1_119 125804 127807 - CBM13 | CBM42 | GH93
CAZyme HRGMv2_2980_1 HRGMv2_2980_1_120 127823 130012 - GH43_32
TC HRGMv2_2980_1 HRGMv2_2980_1_121 130022 130864 - 3.A.1.1.11
TC HRGMv2_2980_1 HRGMv2_2980_1_122 130868 131758 - 3.A.1.1.20
Gene ID: HRGMv2_2980_1_115
Type: TC
Location: 120679 - 122079 (+)
Gene ID: HRGMv2_2980_1_116
Type: pfam
Location: 122155 - 123033 (+)
Gene ID: HRGMv2_2980_1_117
Type:
Location: 123148 - 123807 (-)
Gene ID: HRGMv2_2980_1_118
Type: CAZyme
Location: 124055 - 125788 (-)
Gene ID: HRGMv2_2980_1_119
Type: CAZyme
Location: 125804 - 127807 (-)
Gene ID: HRGMv2_2980_1_120
Type: CAZyme
Location: 127823 - 130012 (-)
Gene ID: HRGMv2_2980_1_121
Type: TC
Location: 130022 - 130864 (-)
Gene ID: HRGMv2_2980_1_122
Type: TC
Location: 130868 - 131758 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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