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Cluster: HRGMv2_2980_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2980_15 HRGMv2_2980_15_29 30983 33433 - GH38
TF HRGMv2_2980_15 HRGMv2_2980_15_30 33720 34988 + 0043669
peptidase HRGMv2_2980_15 HRGMv2_2980_15_31 34978 35883 + S09.UNW
CAZyme HRGMv2_2980_15 HRGMv2_2980_15_32 35985 38189 + GH78
STP HRGMv2_2980_15 HRGMv2_2980_15_33 38257 39564 + SBP_bac_1
TC HRGMv2_2980_15 HRGMv2_2980_15_34 39711 40625 + 3.A.1.1.41
TC HRGMv2_2980_15 HRGMv2_2980_15_35 40622 41473 + 3.A.1.1.18
TC HRGMv2_2980_15 HRGMv2_2980_15_36 41560 42933 - 2.A.26.1.3
NULL(UNKNOWN) HRGMv2_2980_15 HRGMv2_2980_15_37 43229 43429 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2980_15 HRGMv2_2980_15_38 43554 43730 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2980_15 HRGMv2_2980_15_39 45012 46631 + 3.A.1.5.1
pfam HRGMv2_2980_15 HRGMv2_2980_15_40 46752 47612 + EamA | EamA
TC HRGMv2_2980_15 HRGMv2_2980_15_41 47628 48194 + 2.A.107.1.2
Gene ID: HRGMv2_2980_15_29
Type: CAZyme
Location: 30983 - 33433 (-)
Gene ID: HRGMv2_2980_15_30
Type: TF
Location: 33720 - 34988 (+)
Gene ID: HRGMv2_2980_15_31
Type: peptidase
Location: 34978 - 35883 (+)
Gene ID: HRGMv2_2980_15_32
Type: CAZyme
Location: 35985 - 38189 (+)
Gene ID: HRGMv2_2980_15_33
Type: STP
Location: 38257 - 39564 (+)
Gene ID: HRGMv2_2980_15_34
Type: TC
Location: 39711 - 40625 (+)
Gene ID: HRGMv2_2980_15_35
Type: TC
Location: 40622 - 41473 (+)
Gene ID: HRGMv2_2980_15_36
Type: TC
Location: 41560 - 42933 (-)
Gene ID: HRGMv2_2980_15_37
Type:
Location: 43229 - 43429 (-)
Gene ID: HRGMv2_2980_15_38
Type:
Location: 43554 - 43730 (-)
Gene ID: HRGMv2_2980_15_39
Type: TC
Location: 45012 - 46631 (+)
Gene ID: HRGMv2_2980_15_40
Type: pfam
Location: 46752 - 47612 (+)
Gene ID: HRGMv2_2980_15_41
Type: TC
Location: 47628 - 48194 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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