Cluster: HRGMv2_2980_CGC26
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2980
- CGC Family ID: CGCFAM_02302
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2980_13 | HRGMv2_2980_13_45 | 43308 | 44219 | + | 3.A.1.1.20 |
| TC | HRGMv2_2980_13 | HRGMv2_2980_13_46 | 44221 | 45045 | + | 3.A.1.1.39 |
| CAZyme | HRGMv2_2980_13 | HRGMv2_2980_13_47 | 45059 | 46735 | + | GH123 |
| NULL(UNKNOWN) | HRGMv2_2980_13 | HRGMv2_2980_13_48 | 46898 | 47407 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2980_13 | HRGMv2_2980_13_49 | 47887 | 48525 | - | YitT_membrane |
| CAZyme | HRGMv2_2980_13 | HRGMv2_2980_13_50 | 48993 | 51266 | + | GH3 |
Gene ID: HRGMv2_2980_13_45
Type: TC
Location: 43308 - 44219 (+)
Type: TC
Location: 43308 - 44219 (+)
Gene ID: HRGMv2_2980_13_46
Type: TC
Location: 44221 - 45045 (+)
Type: TC
Location: 44221 - 45045 (+)
Gene ID: HRGMv2_2980_13_47
Type: CAZyme
Location: 45059 - 46735 (+)
Type: CAZyme
Location: 45059 - 46735 (+)
Gene ID: HRGMv2_2980_13_48
Type:
Location: 46898 - 47407 (-)
Type:
Location: 46898 - 47407 (-)
Gene ID: HRGMv2_2980_13_49
Type: pfam
Location: 47887 - 48525 (-)
Type: pfam
Location: 47887 - 48525 (-)
Gene ID: HRGMv2_2980_13_50
Type: CAZyme
Location: 48993 - 51266 (+)
Type: CAZyme
Location: 48993 - 51266 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Fournierella
Species
Fournierella sp900543285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.