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Cluster: HRGMv2_2980_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2980_12 HRGMv2_2980_12_86 81878 83395 - GH31_19
CAZyme HRGMv2_2980_12 HRGMv2_2980_12_87 83385 85175 - GH16_24
pfam HRGMv2_2980_12 HRGMv2_2980_12_88 85225 86460 - GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
CAZyme HRGMv2_2980_12 HRGMv2_2980_12_89 86457 88103 - GH123
STP HRGMv2_2980_12 HRGMv2_2980_12_90 88199 89812 - SBP_bac_1
TC HRGMv2_2980_12 HRGMv2_2980_12_91 89901 90779 - 3.A.1.1.10
TC HRGMv2_2980_12 HRGMv2_2980_12_92 90799 91740 - 3.A.1.1.10
TC HRGMv2_2980_12 HRGMv2_2980_12_93 91978 93765 + 9.B.33.1.1
Gene ID: HRGMv2_2980_12_86
Type: CAZyme
Location: 81878 - 83395 (-)
Gene ID: HRGMv2_2980_12_87
Type: CAZyme
Location: 83385 - 85175 (-)
Gene ID: HRGMv2_2980_12_88
Type: pfam
Location: 85225 - 86460 (-)
Gene ID: HRGMv2_2980_12_89
Type: CAZyme
Location: 86457 - 88103 (-)
Gene ID: HRGMv2_2980_12_90
Type: STP
Location: 88199 - 89812 (-)
Gene ID: HRGMv2_2980_12_91
Type: TC
Location: 89901 - 90779 (-)
Gene ID: HRGMv2_2980_12_92
Type: TC
Location: 90799 - 91740 (-)
Gene ID: HRGMv2_2980_12_93
Type: TC
Location: 91978 - 93765 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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