Cluster: HRGMv2_2980_CGC20
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2980
- CGC Family ID: CGCFAM_00680
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2980_10 | HRGMv2_2980_10_10 | 11034 | 13061 | - | GH16_24 |
| TC | HRGMv2_2980_10 | HRGMv2_2980_10_11 | 13118 | 13960 | - | 3.A.1.1.42 |
| TC | HRGMv2_2980_10 | HRGMv2_2980_10_12 | 13957 | 14838 | - | 3.A.1.1.20 |
| STP | HRGMv2_2980_10 | HRGMv2_2980_10_13 | 14910 | 16205 | - | SBP_bac_1 |
| CAZyme | HRGMv2_2980_10 | HRGMv2_2980_10_14 | 16413 | 18032 | - | GH31_19 |
| TF | HRGMv2_2980_10 | HRGMv2_2980_10_15 | 18168 | 19733 | - | HTH_AraC | HTH_AraC |
| TC | HRGMv2_2980_10 | HRGMv2_2980_10_16 | 19736 | 21499 | - | 9.B.33.1.1 |
Gene ID: HRGMv2_2980_10_10
Type: CAZyme
Location: 11034 - 13061 (-)
Type: CAZyme
Location: 11034 - 13061 (-)
Gene ID: HRGMv2_2980_10_11
Type: TC
Location: 13118 - 13960 (-)
Type: TC
Location: 13118 - 13960 (-)
Gene ID: HRGMv2_2980_10_12
Type: TC
Location: 13957 - 14838 (-)
Type: TC
Location: 13957 - 14838 (-)
Gene ID: HRGMv2_2980_10_13
Type: STP
Location: 14910 - 16205 (-)
Type: STP
Location: 14910 - 16205 (-)
Gene ID: HRGMv2_2980_10_14
Type: CAZyme
Location: 16413 - 18032 (-)
Type: CAZyme
Location: 16413 - 18032 (-)
Gene ID: HRGMv2_2980_10_15
Type: TF
Location: 18168 - 19733 (-)
Type: TF
Location: 18168 - 19733 (-)
Gene ID: HRGMv2_2980_10_16
Type: TC
Location: 19736 - 21499 (-)
Type: TC
Location: 19736 - 21499 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Fournierella
Species
Fournierella sp900543285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.