Cluster: HRGMv2_2980_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate: beta-glucan
- Genome ID: HRGMv2_2980
- CGC Family ID: CGCFAM_00107
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2980_6 | HRGMv2_2980_6_104 | 112780 | 114306 | + | 3.A.1.2.20 |
| TC | HRGMv2_2980_6 | HRGMv2_2980_6_105 | 114296 | 115252 | + | 3.A.1.2.1 |
| CAZyme | HRGMv2_2980_6 | HRGMv2_2980_6_106 | 115276 | 116277 | + | GH179 |
| pfam | HRGMv2_2980_6 | HRGMv2_2980_6_107 | 116333 | 117190 | + | AP_endonuc_2 |
| TC | HRGMv2_2980_6 | HRGMv2_2980_6_108 | 117378 | 119489 | - | 3.A.10.1.13 |
| pfam | HRGMv2_2980_6 | HRGMv2_2980_6_109 | 119817 | 120968 | + | Patatin |
| TC | HRGMv2_2980_6 | HRGMv2_2980_6_110 | 121041 | 122669 | + | 4.A.2.1.17 |
Gene ID: HRGMv2_2980_6_104
Type: TC
Location: 112780 - 114306 (+)
Type: TC
Location: 112780 - 114306 (+)
Gene ID: HRGMv2_2980_6_105
Type: TC
Location: 114296 - 115252 (+)
Type: TC
Location: 114296 - 115252 (+)
Gene ID: HRGMv2_2980_6_106
Type: CAZyme
Location: 115276 - 116277 (+)
Type: CAZyme
Location: 115276 - 116277 (+)
Gene ID: HRGMv2_2980_6_107
Type: pfam
Location: 116333 - 117190 (+)
Type: pfam
Location: 116333 - 117190 (+)
Gene ID: HRGMv2_2980_6_108
Type: TC
Location: 117378 - 119489 (-)
Type: TC
Location: 117378 - 119489 (-)
Gene ID: HRGMv2_2980_6_109
Type: pfam
Location: 119817 - 120968 (+)
Type: pfam
Location: 119817 - 120968 (+)
Gene ID: HRGMv2_2980_6_110
Type: TC
Location: 121041 - 122669 (+)
Type: TC
Location: 121041 - 122669 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Fournierella
Species
Fournierella sp900543285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.