dbCAN Logo

Cluster: HRGMv2_2980_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2980_5 HRGMv2_2980_5_90 95668 98667 - GH2
pfam HRGMv2_2980_5 HRGMv2_2980_5_91 98923 100179 + GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
TF HRGMv2_2980_5 HRGMv2_2980_5_92 100211 101758 + HTH_AraC | HTH_AraC
TC HRGMv2_2980_5 HRGMv2_2980_5_93 101786 103513 + 8.A.59.2.1
STP HRGMv2_2980_5 HRGMv2_2980_5_94 103636 104946 + SBP_bac_1
TC HRGMv2_2980_5 HRGMv2_2980_5_95 105089 105997 + 3.A.1.1.42
TC HRGMv2_2980_5 HRGMv2_2980_5_96 105994 106833 + 3.A.1.1.45
CAZyme HRGMv2_2980_5 HRGMv2_2980_5_97 106967 110227 + GH16_24
CAZyme HRGMv2_2980_5 HRGMv2_2980_5_98 110312 111802 + GH31_19
Gene ID: HRGMv2_2980_5_90
Type: CAZyme
Location: 95668 - 98667 (-)
Gene ID: HRGMv2_2980_5_91
Type: pfam
Location: 98923 - 100179 (+)
Gene ID: HRGMv2_2980_5_92
Type: TF
Location: 100211 - 101758 (+)
Gene ID: HRGMv2_2980_5_93
Type: TC
Location: 101786 - 103513 (+)
Gene ID: HRGMv2_2980_5_94
Type: STP
Location: 103636 - 104946 (+)
Gene ID: HRGMv2_2980_5_95
Type: TC
Location: 105089 - 105997 (+)
Gene ID: HRGMv2_2980_5_96
Type: TC
Location: 105994 - 106833 (+)
Gene ID: HRGMv2_2980_5_97
Type: CAZyme
Location: 106967 - 110227 (+)
Gene ID: HRGMv2_2980_5_98
Type: CAZyme
Location: 110312 - 111802 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List