Cluster: HRGMv2_2972_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2972
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2972_9 | HRGMv2_2972_9_68 | 79012 | 81276 | - | 3.A.1.106.2 |
| NULL(UNKNOWN) | HRGMv2_2972_9 | HRGMv2_2972_9_69 | 81702 | 81935 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2972_9 | HRGMv2_2972_9_70 | 81960 | 82589 | - | Spore_II_R |
| CAZyme | HRGMv2_2972_9 | HRGMv2_2972_9_71 | 82951 | 84699 | + | GH163 |
| pfam | HRGMv2_2972_9 | HRGMv2_2972_9_72 | 84752 | 85513 | + | adh_short | KR | adh_short_C2 |
| pfam | HRGMv2_2972_9 | HRGMv2_2972_9_73 | 85780 | 86361 | + | DUF3267 |
| TC | HRGMv2_2972_9 | HRGMv2_2972_9_74 | 86752 | 87972 | + | 2.A.86.1.9 |
Gene ID: HRGMv2_2972_9_68
Type: TC
Location: 79012 - 81276 (-)
Type: TC
Location: 79012 - 81276 (-)
Gene ID: HRGMv2_2972_9_69
Type:
Location: 81702 - 81935 (+)
Type:
Location: 81702 - 81935 (+)
Gene ID: HRGMv2_2972_9_70
Type: pfam
Location: 81960 - 82589 (-)
Type: pfam
Location: 81960 - 82589 (-)
Gene ID: HRGMv2_2972_9_71
Type: CAZyme
Location: 82951 - 84699 (+)
Type: CAZyme
Location: 82951 - 84699 (+)
Gene ID: HRGMv2_2972_9_72
Type: pfam
Location: 84752 - 85513 (+)
Type: pfam
Location: 84752 - 85513 (+)
Gene ID: HRGMv2_2972_9_73
Type: pfam
Location: 85780 - 86361 (+)
Type: pfam
Location: 85780 - 86361 (+)
Gene ID: HRGMv2_2972_9_74
Type: TC
Location: 86752 - 87972 (+)
Type: TC
Location: 86752 - 87972 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAKTAA01
Species
CAKTAA01 sp019415985
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.