Cluster: HRGMv2_2972_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2972
- CGC Family ID: CGCFAM_00089
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2972_7 | HRGMv2_2972_7_43 | 42219 | 43331 | - | 3.A.1.1.26 |
| pfam | HRGMv2_2972_7 | HRGMv2_2972_7_44 | 43563 | 45704 | - | S1 | Tex_N | HHH_3 | HHH_7 | YqgF | Tex_YqgF | HHH_9 | Tex_central_region | S1_RRP5 |
| pfam | HRGMv2_2972_7 | HRGMv2_2972_7_45 | 46164 | 46784 | - | Hexapep | Mac | Hexapep_2 |
| CAZyme | HRGMv2_2972_7 | HRGMv2_2972_7_46 | 47070 | 49226 | - | GH3 |
Gene ID: HRGMv2_2972_7_43
Type: TC
Location: 42219 - 43331 (-)
Type: TC
Location: 42219 - 43331 (-)
Gene ID: HRGMv2_2972_7_44
Type: pfam
Location: 43563 - 45704 (-)
Type: pfam
Location: 43563 - 45704 (-)
Gene ID: HRGMv2_2972_7_45
Type: pfam
Location: 46164 - 46784 (-)
Type: pfam
Location: 46164 - 46784 (-)
Gene ID: HRGMv2_2972_7_46
Type: CAZyme
Location: 47070 - 49226 (-)
Type: CAZyme
Location: 47070 - 49226 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAKTAA01
Species
CAKTAA01 sp019415985
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.