Cluster: HRGMv2_2972_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2972
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2972_7 | HRGMv2_2972_7_25 | 24285 | 24992 | + | 3.A.1.15.4 |
| TC | HRGMv2_2972_7 | HRGMv2_2972_7_26 | 24985 | 25803 | + | 3.A.1.15.3 |
| CAZyme | HRGMv2_2972_7 | HRGMv2_2972_7_27 | 26030 | 27121 | + | GH179 |
| pfam | HRGMv2_2972_7 | HRGMv2_2972_7_28 | 27255 | 27977 | + | AP_endonuc_2 |
| NULL(UNKNOWN) | HRGMv2_2972_7 | HRGMv2_2972_7_29 | 28018 | 28320 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2972_7 | HRGMv2_2972_7_30 | 28350 | 29633 | + | GH18 |
Gene ID: HRGMv2_2972_7_25
Type: TC
Location: 24285 - 24992 (+)
Type: TC
Location: 24285 - 24992 (+)
Gene ID: HRGMv2_2972_7_26
Type: TC
Location: 24985 - 25803 (+)
Type: TC
Location: 24985 - 25803 (+)
Gene ID: HRGMv2_2972_7_27
Type: CAZyme
Location: 26030 - 27121 (+)
Type: CAZyme
Location: 26030 - 27121 (+)
Gene ID: HRGMv2_2972_7_28
Type: pfam
Location: 27255 - 27977 (+)
Type: pfam
Location: 27255 - 27977 (+)
Gene ID: HRGMv2_2972_7_29
Type:
Location: 28018 - 28320 (+)
Type:
Location: 28018 - 28320 (+)
Gene ID: HRGMv2_2972_7_30
Type: CAZyme
Location: 28350 - 29633 (+)
Type: CAZyme
Location: 28350 - 29633 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAKTAA01
Species
CAKTAA01 sp019415985
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.