Cluster: HRGMv2_2972_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2972
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2972_48 | HRGMv2_2972_48_8 | 7080 | 8594 | - | 3.A.1.120.2 |
| TC | HRGMv2_2972_48 | HRGMv2_2972_48_9 | 9173 | 10630 | - | 3.B.1.1.6 |
| TC | HRGMv2_2972_48 | HRGMv2_2972_48_10 | 10711 | 11883 | - | 3.B.1.1.3 |
| TC | HRGMv2_2972_48 | HRGMv2_2972_48_11 | 12068 | 12427 | - | 3.B.1.1.3 |
| pfam | HRGMv2_2972_48 | HRGMv2_2972_48_12 | 12457 | 12732 | - | OAD_gamma |
| CAZyme | HRGMv2_2972_48 | HRGMv2_2972_48_13 | 13242 | 14573 | - | GH163 |
Gene ID: HRGMv2_2972_48_8
Type: TC
Location: 7080 - 8594 (-)
Type: TC
Location: 7080 - 8594 (-)
Gene ID: HRGMv2_2972_48_9
Type: TC
Location: 9173 - 10630 (-)
Type: TC
Location: 9173 - 10630 (-)
Gene ID: HRGMv2_2972_48_10
Type: TC
Location: 10711 - 11883 (-)
Type: TC
Location: 10711 - 11883 (-)
Gene ID: HRGMv2_2972_48_11
Type: TC
Location: 12068 - 12427 (-)
Type: TC
Location: 12068 - 12427 (-)
Gene ID: HRGMv2_2972_48_12
Type: pfam
Location: 12457 - 12732 (-)
Type: pfam
Location: 12457 - 12732 (-)
Gene ID: HRGMv2_2972_48_13
Type: CAZyme
Location: 13242 - 14573 (-)
Type: CAZyme
Location: 13242 - 14573 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAKTAA01
Species
CAKTAA01 sp019415985
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.