Cluster: HRGMv2_2972_CGC13
🧬 Cluster Details
- Gene Count: 19
- CAZyme Count: 9
- Substrate:
- Genome ID: HRGMv2_2972
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2972_25 | HRGMv2_2972_25_10 | 8421 | 8867 | - | 9.A.11.1.1 |
| NULL(UNKNOWN) | HRGMv2_2972_25 | HRGMv2_2972_25_11 | 9141 | 9569 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2972_25 | HRGMv2_2972_25_12 | 9666 | 10028 | + | DUF4234 | DUF4234 |
| TC | HRGMv2_2972_25 | HRGMv2_2972_25_13 | 10650 | 12569 | + | 3.A.1.121.4 |
| pfam | HRGMv2_2972_25 | HRGMv2_2972_25_14 | 12575 | 13051 | - | DUF4830 |
| TC | HRGMv2_2972_25 | HRGMv2_2972_25_15 | 13508 | 14905 | + | 2.A.86.1.8 |
| pfam | HRGMv2_2972_25 | HRGMv2_2972_25_16 | 14940 | 15335 | + | 4HBT | FlK |
| NULL(UNKNOWN) | HRGMv2_2972_25 | HRGMv2_2972_25_17 | 15365 | 15580 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2972_25 | HRGMv2_2972_25_18 | 16008 | 17912 | - | GH163 |
| CAZyme | HRGMv2_2972_25 | HRGMv2_2972_25_19 | 18029 | 19963 | - | GH163 |
| pfam | HRGMv2_2972_25 | HRGMv2_2972_25_20 | 20247 | 22937 | - | SLH | SLH | SLH | GH123_cat |
| CAZyme | HRGMv2_2972_25 | HRGMv2_2972_25_21 | 23239 | 25152 | - | GH163 |
| CAZyme | HRGMv2_2972_25 | HRGMv2_2972_25_22 | 25455 | 27428 | - | GH163 |
| CAZyme | HRGMv2_2972_25 | HRGMv2_2972_25_23 | 27521 | 29473 | - | GH163 |
| pfam | HRGMv2_2972_25 | HRGMv2_2972_25_24 | 29757 | 32447 | - | SLH | SLH | SLH | GH123_cat |
| CAZyme | HRGMv2_2972_25 | HRGMv2_2972_25_25 | 32749 | 34662 | - | GH163 |
| CAZyme | HRGMv2_2972_25 | HRGMv2_2972_25_26 | 34965 | 36938 | - | GH163 |
| CAZyme | HRGMv2_2972_25 | HRGMv2_2972_25_27 | 37031 | 39046 | - | GH163 |
| CAZyme | HRGMv2_2972_25 | HRGMv2_2972_25_28 | 39272 | 41182 | - | GH163 |
Gene ID: HRGMv2_2972_25_10
Type: TC
Location: 8421 - 8867 (-)
Type: TC
Location: 8421 - 8867 (-)
Gene ID: HRGMv2_2972_25_11
Type:
Location: 9141 - 9569 (+)
Type:
Location: 9141 - 9569 (+)
Gene ID: HRGMv2_2972_25_12
Type: pfam
Location: 9666 - 10028 (+)
Type: pfam
Location: 9666 - 10028 (+)
Gene ID: HRGMv2_2972_25_13
Type: TC
Location: 10650 - 12569 (+)
Type: TC
Location: 10650 - 12569 (+)
Gene ID: HRGMv2_2972_25_14
Type: pfam
Location: 12575 - 13051 (-)
Type: pfam
Location: 12575 - 13051 (-)
Gene ID: HRGMv2_2972_25_15
Type: TC
Location: 13508 - 14905 (+)
Type: TC
Location: 13508 - 14905 (+)
Gene ID: HRGMv2_2972_25_16
Type: pfam
Location: 14940 - 15335 (+)
Type: pfam
Location: 14940 - 15335 (+)
Gene ID: HRGMv2_2972_25_17
Type:
Location: 15365 - 15580 (-)
Type:
Location: 15365 - 15580 (-)
Gene ID: HRGMv2_2972_25_18
Type: CAZyme
Location: 16008 - 17912 (-)
Type: CAZyme
Location: 16008 - 17912 (-)
Gene ID: HRGMv2_2972_25_19
Type: CAZyme
Location: 18029 - 19963 (-)
Type: CAZyme
Location: 18029 - 19963 (-)
Gene ID: HRGMv2_2972_25_20
Type: pfam
Location: 20247 - 22937 (-)
Type: pfam
Location: 20247 - 22937 (-)
Gene ID: HRGMv2_2972_25_21
Type: CAZyme
Location: 23239 - 25152 (-)
Type: CAZyme
Location: 23239 - 25152 (-)
Gene ID: HRGMv2_2972_25_22
Type: CAZyme
Location: 25455 - 27428 (-)
Type: CAZyme
Location: 25455 - 27428 (-)
Gene ID: HRGMv2_2972_25_23
Type: CAZyme
Location: 27521 - 29473 (-)
Type: CAZyme
Location: 27521 - 29473 (-)
Gene ID: HRGMv2_2972_25_24
Type: pfam
Location: 29757 - 32447 (-)
Type: pfam
Location: 29757 - 32447 (-)
Gene ID: HRGMv2_2972_25_25
Type: CAZyme
Location: 32749 - 34662 (-)
Type: CAZyme
Location: 32749 - 34662 (-)
Gene ID: HRGMv2_2972_25_26
Type: CAZyme
Location: 34965 - 36938 (-)
Type: CAZyme
Location: 34965 - 36938 (-)
Gene ID: HRGMv2_2972_25_27
Type: CAZyme
Location: 37031 - 39046 (-)
Type: CAZyme
Location: 37031 - 39046 (-)
Gene ID: HRGMv2_2972_25_28
Type: CAZyme
Location: 39272 - 41182 (-)
Type: CAZyme
Location: 39272 - 41182 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAKTAA01
Species
CAKTAA01 sp019415985
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.