Cluster: HRGMv2_2966_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2966
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2966_8 | HRGMv2_2966_8_16 | 18851 | 19936 | + | GH179 |
| STP | HRGMv2_2966_8 | HRGMv2_2966_8_17 | 20198 | 21490 | - | Aminotran_1_2 |
| pfam | HRGMv2_2966_8 | HRGMv2_2966_8_18 | 21543 | 22466 | - | SUFBD_core |
| TC | HRGMv2_2966_8 | HRGMv2_2966_8_19 | 22491 | 23246 | - | 1.B.42.1.2 |
Gene ID: HRGMv2_2966_8_16
Type: CAZyme
Location: 18851 - 19936 (+)
Type: CAZyme
Location: 18851 - 19936 (+)
Gene ID: HRGMv2_2966_8_17
Type: STP
Location: 20198 - 21490 (-)
Type: STP
Location: 20198 - 21490 (-)
Gene ID: HRGMv2_2966_8_18
Type: pfam
Location: 21543 - 22466 (-)
Type: pfam
Location: 21543 - 22466 (-)
Gene ID: HRGMv2_2966_8_19
Type: TC
Location: 22491 - 23246 (-)
Type: TC
Location: 22491 - 23246 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS1696
Species
UMGS1696 sp900554225
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2966_8_16 | vegan > omnivore | 1.29541 | 0.03783 |