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Cluster: HRGMv2_2966_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2966_6 HRGMv2_2966_6_43 61444 64014 + CBM67 | GH78
NULL(UNKNOWN) HRGMv2_2966_6 HRGMv2_2966_6_44 64129 65583 - NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_2966_6 HRGMv2_2966_6_45 65963 66829 + HTH_AraC
TC HRGMv2_2966_6 HRGMv2_2966_6_46 67513 70056 + 4.C.1.1.7
NULL(UNKNOWN) HRGMv2_2966_6 HRGMv2_2966_6_47 70147 72351 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2966_6 HRGMv2_2966_6_48 72898 74751 - 3.A.3.6.5
STP HRGMv2_2966_6 HRGMv2_2966_6_49 74866 75087 - HMA
TC HRGMv2_2966_6 HRGMv2_2966_6_50 75417 76790 + 2.A.66.1.32
Gene ID: HRGMv2_2966_6_43
Type: CAZyme
Location: 61444 - 64014 (+)
Gene ID: HRGMv2_2966_6_44
Type:
Location: 64129 - 65583 (-)
Gene ID: HRGMv2_2966_6_45
Type: TF
Location: 65963 - 66829 (+)
Gene ID: HRGMv2_2966_6_46
Type: TC
Location: 67513 - 70056 (+)
Gene ID: HRGMv2_2966_6_47
Type:
Location: 70147 - 72351 (-)
Gene ID: HRGMv2_2966_6_48
Type: TC
Location: 72898 - 74751 (-)
Gene ID: HRGMv2_2966_6_49
Type: STP
Location: 74866 - 75087 (-)
Gene ID: HRGMv2_2966_6_50
Type: TC
Location: 75417 - 76790 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
UMGS1696
→
Species
UMGS1696 sp900554225

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2966_6_43 vegan > omnivore 1.69314 0.03783

🧭 Explore Read Mapping of CGC

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