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Cluster: HRGMv2_2966_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2966_5 HRGMv2_2966_5_62 66019 67104 - GH179
CAZyme HRGMv2_2966_5 HRGMv2_2966_5_63 67292 68386 - GH179
TC HRGMv2_2966_5 HRGMv2_2966_5_64 68761 69591 - 3.D.6.1.3
TC HRGMv2_2966_5 HRGMv2_2966_5_65 69611 70189 - 3.D.6.1.2
TC HRGMv2_2966_5 HRGMv2_2966_5_66 70182 70976 - 3.D.6.1.2
TC HRGMv2_2966_5 HRGMv2_2966_5_67 70992 72926 - 3.D.6.1.2
TC HRGMv2_2966_5 HRGMv2_2966_5_68 72916 74019 - 3.D.6.1.2
TC HRGMv2_2966_5 HRGMv2_2966_5_69 74040 75380 - 3.D.6.1.2
Gene ID: HRGMv2_2966_5_62
Type: CAZyme
Location: 66019 - 67104 (-)
Gene ID: HRGMv2_2966_5_63
Type: CAZyme
Location: 67292 - 68386 (-)
Gene ID: HRGMv2_2966_5_64
Type: TC
Location: 68761 - 69591 (-)
Gene ID: HRGMv2_2966_5_65
Type: TC
Location: 69611 - 70189 (-)
Gene ID: HRGMv2_2966_5_66
Type: TC
Location: 70182 - 70976 (-)
Gene ID: HRGMv2_2966_5_67
Type: TC
Location: 70992 - 72926 (-)
Gene ID: HRGMv2_2966_5_68
Type: TC
Location: 72916 - 74019 (-)
Gene ID: HRGMv2_2966_5_69
Type: TC
Location: 74040 - 75380 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
UMGS1696
→
Species
UMGS1696 sp900554225

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2966_5_62 vegan > omnivore 1.10281 0.03783

🧭 Explore Read Mapping of CGC

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