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Cluster: HRGMv2_2966_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2966_78 HRGMv2_2966_78_3 1891 2340 + 9.A.11.1.1
TC HRGMv2_2966_78 HRGMv2_2966_78_4 2316 3221 - 2.A.115.1.1
CAZyme HRGMv2_2966_78 HRGMv2_2966_78_5 3327 4568 + GH29
NULL(UNKNOWN) HRGMv2_2966_78 HRGMv2_2966_78_6 5020 5112 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2966_78 HRGMv2_2966_78_7 5366 5503 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2966_78 HRGMv2_2966_78_8 5520 7310 + 3.A.1.111.2
TC HRGMv2_2966_78 HRGMv2_2966_78_9 7307 9073 + 3.A.1.111.2
Gene ID: HRGMv2_2966_78_3
Type: TC
Location: 1891 - 2340 (+)
Gene ID: HRGMv2_2966_78_4
Type: TC
Location: 2316 - 3221 (-)
Gene ID: HRGMv2_2966_78_5
Type: CAZyme
Location: 3327 - 4568 (+)
Gene ID: HRGMv2_2966_78_6
Type:
Location: 5020 - 5112 (+)
Gene ID: HRGMv2_2966_78_7
Type:
Location: 5366 - 5503 (+)
Gene ID: HRGMv2_2966_78_8
Type: TC
Location: 5520 - 7310 (+)
Gene ID: HRGMv2_2966_78_9
Type: TC
Location: 7307 - 9073 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
UMGS1696
→
Species
UMGS1696 sp900554225

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2966_78_6 vegetarian > vegan 2.38711 0.00821

🧭 Explore Read Mapping of CGC

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