Cluster: HRGMv2_2966_CGC30
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2966
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2966_65 | HRGMv2_2966_65_2 | 1771 | 2820 | + | GH179 |
| pfam | HRGMv2_2966_65 | HRGMv2_2966_65_3 | 3137 | 4414 | + | MoCF_biosynth | CinA | CinA_KH |
| pfam | HRGMv2_2966_65 | HRGMv2_2966_65_4 | 4555 | 5301 | - | ThuA |
| CAZyme | HRGMv2_2966_65 | HRGMv2_2966_65_5 | 5352 | 6410 | - | GH109 |
| TC | HRGMv2_2966_65 | HRGMv2_2966_65_6 | 6469 | 8286 | - | 3.A.1.135.5 |
| TC | HRGMv2_2966_65 | HRGMv2_2966_65_7 | 8279 | 9982 | - | 3.A.1.135.7 |
Gene ID: HRGMv2_2966_65_2
Type: CAZyme
Location: 1771 - 2820 (+)
Type: CAZyme
Location: 1771 - 2820 (+)
Gene ID: HRGMv2_2966_65_3
Type: pfam
Location: 3137 - 4414 (+)
Type: pfam
Location: 3137 - 4414 (+)
Gene ID: HRGMv2_2966_65_4
Type: pfam
Location: 4555 - 5301 (-)
Type: pfam
Location: 4555 - 5301 (-)
Gene ID: HRGMv2_2966_65_5
Type: CAZyme
Location: 5352 - 6410 (-)
Type: CAZyme
Location: 5352 - 6410 (-)
Gene ID: HRGMv2_2966_65_6
Type: TC
Location: 6469 - 8286 (-)
Type: TC
Location: 6469 - 8286 (-)
Gene ID: HRGMv2_2966_65_7
Type: TC
Location: 8279 - 9982 (-)
Type: TC
Location: 8279 - 9982 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS1696
Species
UMGS1696 sp900554225
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2966_65_6 | vegan > omnivore | 1.12354 | 0.03783 |