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Cluster: HRGMv2_2966_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2966_42 HRGMv2_2966_42_4 3874 4557 - 2.A.38.4.4
TC HRGMv2_2966_42 HRGMv2_2966_42_5 4638 5954 - 2.A.38.4.3
STP HRGMv2_2966_42 HRGMv2_2966_42_6 5951 6997 - HhH-GPD
CAZyme HRGMv2_2966_42 HRGMv2_2966_42_7 7055 8254 - CE4
NULL(UNKNOWN) HRGMv2_2966_42 HRGMv2_2966_42_8 8556 9182 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2966_42 HRGMv2_2966_42_9 9364 10179 - CBM9
STP HRGMv2_2966_42 HRGMv2_2966_42_10 10670 10888 - HMA
TC HRGMv2_2966_42 HRGMv2_2966_42_11 11063 13327 - 3.A.3.5.15
Gene ID: HRGMv2_2966_42_4
Type: TC
Location: 3874 - 4557 (-)
Gene ID: HRGMv2_2966_42_5
Type: TC
Location: 4638 - 5954 (-)
Gene ID: HRGMv2_2966_42_6
Type: STP
Location: 5951 - 6997 (-)
Gene ID: HRGMv2_2966_42_7
Type: CAZyme
Location: 7055 - 8254 (-)
Gene ID: HRGMv2_2966_42_8
Type:
Location: 8556 - 9182 (+)
Gene ID: HRGMv2_2966_42_9
Type: CAZyme
Location: 9364 - 10179 (-)
Gene ID: HRGMv2_2966_42_10
Type: STP
Location: 10670 - 10888 (-)
Gene ID: HRGMv2_2966_42_11
Type: TC
Location: 11063 - 13327 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
UMGS1696
→
Species
UMGS1696 sp900554225

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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