Cluster: HRGMv2_2966_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2966
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2966_27 | HRGMv2_2966_27_30 | 27107 | 29455 | - | GH2 |
| NULL(UNKNOWN) | HRGMv2_2966_27 | HRGMv2_2966_27_31 | 29468 | 30025 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2966_27 | HRGMv2_2966_27_32 | 30332 | 32419 | + | Gln-synt_C | GSIII_N | Gln-synt_C-ter |
| TC | HRGMv2_2966_27 | HRGMv2_2966_27_33 | 32874 | 34445 | + | 2.A.21.2.5 |
Gene ID: HRGMv2_2966_27_30
Type: CAZyme
Location: 27107 - 29455 (-)
Type: CAZyme
Location: 27107 - 29455 (-)
Gene ID: HRGMv2_2966_27_31
Type:
Location: 29468 - 30025 (-)
Type:
Location: 29468 - 30025 (-)
Gene ID: HRGMv2_2966_27_32
Type: pfam
Location: 30332 - 32419 (+)
Type: pfam
Location: 30332 - 32419 (+)
Gene ID: HRGMv2_2966_27_33
Type: TC
Location: 32874 - 34445 (+)
Type: TC
Location: 32874 - 34445 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS1696
Species
UMGS1696 sp900554225
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2966_27_30 | vegan > omnivore | 1.70046 | 0.03783 |