Cluster: HRGMv2_2966_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2966
- CGC Family ID: CGCFAM_00027
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2966_20 | HRGMv2_2966_20_7 | 5560 | 6156 | - | 3.A.1.25.3 |
| CAZyme | HRGMv2_2966_20 | HRGMv2_2966_20_8 | 6362 | 8068 | + | GH110 |
| NULL(UNKNOWN) | HRGMv2_2966_20 | HRGMv2_2966_20_9 | 8169 | 8843 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2966_20 | HRGMv2_2966_20_10 | 9050 | 10942 | + | 4.A.1.2.11 |
| CAZyme | HRGMv2_2966_20 | HRGMv2_2966_20_11 | 10939 | 12405 | + | GH1 |
Gene ID: HRGMv2_2966_20_7
Type: TC
Location: 5560 - 6156 (-)
Type: TC
Location: 5560 - 6156 (-)
Gene ID: HRGMv2_2966_20_8
Type: CAZyme
Location: 6362 - 8068 (+)
Type: CAZyme
Location: 6362 - 8068 (+)
Gene ID: HRGMv2_2966_20_9
Type:
Location: 8169 - 8843 (-)
Type:
Location: 8169 - 8843 (-)
Gene ID: HRGMv2_2966_20_10
Type: TC
Location: 9050 - 10942 (+)
Type: TC
Location: 9050 - 10942 (+)
Gene ID: HRGMv2_2966_20_11
Type: CAZyme
Location: 10939 - 12405 (+)
Type: CAZyme
Location: 10939 - 12405 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS1696
Species
UMGS1696 sp900554225
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2966_20_11 | vegan > omnivore | 1.95276 | 0.03783 |