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Cluster: HRGMv2_2966_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2966_15 HRGMv2_2966_15_6 5686 7827 - GH78
STP HRGMv2_2966_15 HRGMv2_2966_15_7 7834 9261 - SBP_bac_1
TF HRGMv2_2966_15 HRGMv2_2966_15_8 9510 10388 + HTH_AraC
CAZyme HRGMv2_2966_15 HRGMv2_2966_15_9 10383 12365 - GH141
TC HRGMv2_2966_15 HRGMv2_2966_15_10 12582 14315 + 3.A.1.135.5
TC HRGMv2_2966_15 HRGMv2_2966_15_11 14312 16072 + 3.A.1.135.5
TC HRGMv2_2966_15 HRGMv2_2966_15_12 16195 17004 - 3.A.1.24.5
TC HRGMv2_2966_15 HRGMv2_2966_15_13 17105 17791 - 3.A.1.24.5
TC HRGMv2_2966_15 HRGMv2_2966_15_14 17784 18809 - 3.A.1.24.2
Gene ID: HRGMv2_2966_15_6
Type: CAZyme
Location: 5686 - 7827 (-)
Gene ID: HRGMv2_2966_15_7
Type: STP
Location: 7834 - 9261 (-)
Gene ID: HRGMv2_2966_15_8
Type: TF
Location: 9510 - 10388 (+)
Gene ID: HRGMv2_2966_15_9
Type: CAZyme
Location: 10383 - 12365 (-)
Gene ID: HRGMv2_2966_15_10
Type: TC
Location: 12582 - 14315 (+)
Gene ID: HRGMv2_2966_15_11
Type: TC
Location: 14312 - 16072 (+)
Gene ID: HRGMv2_2966_15_12
Type: TC
Location: 16195 - 17004 (-)
Gene ID: HRGMv2_2966_15_13
Type: TC
Location: 17105 - 17791 (-)
Gene ID: HRGMv2_2966_15_14
Type: TC
Location: 17784 - 18809 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
UMGS1696
→
Species
UMGS1696 sp900554225

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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