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Cluster: HRGMv2_2963_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2963_2 HRGMv2_2963_2_40 42331 43143 - GT8
pfam HRGMv2_2963_2 HRGMv2_2963_2_41 43158 44264 - DUF3810
TC HRGMv2_2963_2 HRGMv2_2963_2_42 44267 45004 - 3.A.1.5.10
TC HRGMv2_2963_2 HRGMv2_2963_2_43 45001 45792 - 3.A.1.5.34
TC HRGMv2_2963_2 HRGMv2_2963_2_44 45792 46604 - 3.A.1.5.27
TC HRGMv2_2963_2 HRGMv2_2963_2_45 46601 47551 - 3.A.1.5.32
TC HRGMv2_2963_2 HRGMv2_2963_2_46 47603 49153 - 3.A.1.5.27
Gene ID: HRGMv2_2963_2_40
Type: CAZyme
Location: 42331 - 43143 (-)
Gene ID: HRGMv2_2963_2_41
Type: pfam
Location: 43158 - 44264 (-)
Gene ID: HRGMv2_2963_2_42
Type: TC
Location: 44267 - 45004 (-)
Gene ID: HRGMv2_2963_2_43
Type: TC
Location: 45001 - 45792 (-)
Gene ID: HRGMv2_2963_2_44
Type: TC
Location: 45792 - 46604 (-)
Gene ID: HRGMv2_2963_2_45
Type: TC
Location: 46601 - 47551 (-)
Gene ID: HRGMv2_2963_2_46
Type: TC
Location: 47603 - 49153 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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