Cluster: HRGMv2_2960_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2960
- CGC Family ID: CGCFAM_04417
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2960_3 | HRGMv2_2960_3_21 | 19068 | 21038 | + | 9.B.106.2.2 |
| STP | HRGMv2_2960_3 | HRGMv2_2960_3_22 | 21075 | 22361 | + | EPSP_synthase |
| CAZyme | HRGMv2_2960_3 | HRGMv2_2960_3_23 | 22381 | 23340 | - | GT2 |
| TC | HRGMv2_2960_3 | HRGMv2_2960_3_24 | 23344 | 24378 | - | 4.D.2.1.5 |
Gene ID: HRGMv2_2960_3_21
Type: TC
Location: 19068 - 21038 (+)
Type: TC
Location: 19068 - 21038 (+)
Gene ID: HRGMv2_2960_3_22
Type: STP
Location: 21075 - 22361 (+)
Type: STP
Location: 21075 - 22361 (+)
Gene ID: HRGMv2_2960_3_23
Type: CAZyme
Location: 22381 - 23340 (-)
Type: CAZyme
Location: 22381 - 23340 (-)
Gene ID: HRGMv2_2960_3_24
Type: TC
Location: 23344 - 24378 (-)
Type: TC
Location: 23344 - 24378 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1491
Species
UMGS1491 sp900554775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.