Cluster: HRGMv2_2957_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2957
- CGC Family ID: CGCFAM_00153
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2957_3 | HRGMv2_2957_3_151 | 173598 | 178913 | - | GH20 |
| TC | HRGMv2_2957_3 | HRGMv2_2957_3_152 | 179237 | 179950 | - | 3.A.1.4.10 |
| TC | HRGMv2_2957_3 | HRGMv2_2957_3_153 | 179943 | 180782 | - | 3.A.1.4.10 |
| TC | HRGMv2_2957_3 | HRGMv2_2957_3_154 | 180779 | 181924 | - | 3.A.1.4.8 |
| TC | HRGMv2_2957_3 | HRGMv2_2957_3_155 | 181935 | 182813 | - | 3.A.1.4.10 |
Gene ID: HRGMv2_2957_3_151
Type: CAZyme
Location: 173598 - 178913 (-)
Type: CAZyme
Location: 173598 - 178913 (-)
Gene ID: HRGMv2_2957_3_152
Type: TC
Location: 179237 - 179950 (-)
Type: TC
Location: 179237 - 179950 (-)
Gene ID: HRGMv2_2957_3_153
Type: TC
Location: 179943 - 180782 (-)
Type: TC
Location: 179943 - 180782 (-)
Gene ID: HRGMv2_2957_3_154
Type: TC
Location: 180779 - 181924 (-)
Type: TC
Location: 180779 - 181924 (-)
Gene ID: HRGMv2_2957_3_155
Type: TC
Location: 181935 - 182813 (-)
Type: TC
Location: 181935 - 182813 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-390
Species
CAG-390 sp900753295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.